SubtiBank SubtiBank
yerB [2018-02-08 09:19:32]
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yerB [2018-02-08 09:19:32]

PcrA interaction protein
locus
BSU06570
pI
8.16
mw
36.81 kDa
protein length
331 aa Sequence Blast
gene length
993 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.2|Mobile genetic elements] → [category|SW 5.2.2|Additional genes]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.8|Phosphorylation on either a Ser, Thr or Tyr residue]

    • Gene

    Coordinates
    715,433 → 716,428

    The protein

    Modification

  • phosphorylation on (Thr-97 OR Ser-103) [Pubmed|17218307]

    • Structure

  • [PDB|2PSB]

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot), Polar (Septum) [Pubmed|16479537]

    • Expression and Regulation

    Operons

    genes
    [gene|BE1F7BA77CE8B6A1A2D22F31421C27F2E954816A|yerB]-[gene|B948BD67148DC53B371E6748347982067CE28C36|yerC]
    description
    [pubmed|22383849]

    regulatory mechanism

  • [protein|2C54FE2ADC82FF414D732018C90649D477A925AD|Spo0A]: activation, [Pubmed|14651647], in [regulon|2C54FE2ADC82FF414D732018C90649D477A925AD|Spo0A regulon]

    • regulation

  • expressed under conditions that trigger sporulation ([SW|Spo0A]) [Pubmed|14651647]
    • view in new tab

    genes
    [gene|E20A5429BCD8719A403229AFB200225EA14EE2DB|yerA]-[gene|BE1F7BA77CE8B6A1A2D22F31421C27F2E954816A|yerB]-[gene|B948BD67148DC53B371E6748347982067CE28C36|yerC]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A912 (yerB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/912 NBRP B. subtilis, Japan]
  • BKE06570 (Δ[gene|BE1F7BA77CE8B6A1A2D22F31421C27F2E954816A|yerB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE06570 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATGTCGGCTCCCTGCTC, downstream forward: _UP4_AGTAAAGGAGAAGGTGTGTA
  • BKK06570 (Δ[gene|BE1F7BA77CE8B6A1A2D22F31421C27F2E954816A|yerB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK06570 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATGTCGGCTCCCTGCTC, downstream forward: _UP4_AGTAAAGGAGAAGGTGTGTA

    • References

  • 14651647,16479537,17218307,12073041